Illumina RNA sequencing of transcriptome paired-end library 'SM-49II8... - SRA

SRX508939: Illumina RNA sequencing of transcriptome paired-end library 'SM-49II8' containing sample '35-Ps5_ND_3_A' from individual 'Ps5_OFXS-1'
8 ILLUMINA (Illumina HiSeq 2000) runs: 9.8M spots, 1.3G bases, 630.4Mb downloads

UUID: 4936f357-9e85-41c5-84f0-a6c82bfe1dbe

Design: Illumina sequencing of Mycobacterium tuberculosis Mp5_Rv2745c via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC RNASeq

PRJNA236897 • SRP040861 • All experiments • All runs

Sample:

SAMN02672808 • SRS587647 • All experiments • All runs

Organism: Mycobacterium tuberculosis Mp5_Rv2745c

Library:

Name: SM-49II8

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward69 reverse

Experiment attributes: (show all 10 attributes...) (hide...)

analysis_type: Resequencing

gssr_id: 480147.0

library_type: cDNAShotgunReadTwoSense

lsid: BROAD:SEQUENCING_SAMPLE:480147.0

material_type: New Tech Library

product_order: PDO-3074

product_part_number: P-SEQ-0003

project: G61304

research_project: RP-564

work_request: 40185

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-10 11:36:49.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 8 runs, 9.8M spots, 1.3G bases, 630.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1214910	1,245,408	169.4M	80.3Mb	2014-04-03
SRR1218753	1,200,691	163.3M	76.9Mb	2014-04-06
SRR1219272	1,184,244	161.1M	75.3Mb	2014-04-06
SRR1220029	1,260,627	171.4M	81.6Mb	2014-04-07
SRR1220370	1,182,771	160.9M	75.8Mb	2014-04-07
SRR1222223	1,252,741	170.4M	80.9Mb	2014-04-08
SRR1232681	1,226,988	166.9M	79.3Mb	2014-04-11
SRR1232980	1,245,359	169.4M	80.3Mb	2014-04-11

ID:: 708243

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